PUBLICATIONS

For a full list of publications and citations, see My Bibliography and Google Scholar.

Orchid ID: https://orcid.org/0000-0002-1969-2313

Pubmed: https://pubmed.ncbi.nlm.nih.gov/?term=marco+osterwalder
Scopus: https://www.scopus.com/authid/detail.uri?authorId=36178419000

2024

A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival.

Abassah-Oppong S, Zoia M, Mannion BJ, Rouco R, Tissières V, Spurrell CH, Roland V, Darbellay F, Itum A, Gamart J, Festa-Daroux TA, Sullivan CS, Rodríguez-Carballo E, Fukuda-Yuzawa Y, Hunter RD, Novak CS, Plajzer-Frick I, Tran S, Akiyama JA, Dickel DE, Lopez-Rios J, Barozzi I, Andrey G, Visel A, Pennacchio LA, Cobb J*, Osterwalder M* (2024).

Nature Communications, 15, 8793. PMID: 39389973 PDF

Dynamic enhancer landscapes in human craniofacial development.

Rajderkar SS, Paraiso K, Amaral ML, Kosicki M, Cook LE, Darbellay F, Spurrell CH, Osterwalder M, Zhu Y, Wu H, Afzal SY, Matthew J. Blow, Kelman G, Barozzi I, Fukuda-Yuzawa Y, Akiyama JA, Afzal V, Tran S, Plajzer-Frick I, Novak CS, Kato M, Hunter RD, von Maydell K, Wang A, Lin L, Preissl S, Lisgo S, Ren V, Dickel DE, Pennacchio LA, Visel A (2024).

Nature Communications, 15(1), 2030. PMID: 38448444 PDF

Identification of ancestral gnathostome Gli3 enhancers with activity in mammals.

Ali S, Abrar M, Hussain I, Batool F, Raza RZ, Khatoon H, Zoia M, Visel A, Shubin NH*, Osterwalder M*, Abbasi AA* (2024).

Dev Growth Differ, 66(1), 75–88. PMID: 37925606 PDF *Co-last author

Identification and characterization of Hand2 upstream genomic enhancers active in developing stomach and limbs.

Ferguson CA, Firulli BA, Zoia M, Osterwalder M*, Firulli AB* (2024).

Developmental Dynamics, 253(2), 215–232. PMID: 37551791 PDF *Co-last author

2023

Conserved enhancers control notochord expression of vertebrate Brachyury.

Kemmler CL, Smolikova J , Moran HR, Mannion BJ , Knapp D, Lim F, Czarkwiani A, Hermosilla Aguayo V, Rapp V, Fitch OE, Bötschi S, Selleri L, Farley E, Braasch I, Yun M, Visel A, Osterwalder M, Mosimann C, Kozmik Z, Burger A (2023).

Nature Communications, 14(1):6594. PMID: 37852970 PDF

Induction of kidney-related gene programs through co-option of SALL1 in mole ovotestes.

Schindler M, Osterwalder M, Harabula I, Wittler L, Tzika AC, Dechmann DKN, Vingron M, Visel A, Haas S, Real FM (2023).

Development, dev.201562. PMID: 37519269 PDF

A spatio-temporally constrained gene regulatory network directed by PBX1/2 acquires limb patterning specificity via HAND2.

Losa M, Barozzi I, Osterwalder M, Hermosilla-Aguayo V, Morabito A, Chacón BH, Zarrineh P, Girdziusaite A, Benazet JD, Zhu J, Mackem S, Capellini TD, Dickel D, Bobola N, Zuniga A, Visel A, Zeller R, Selleri L (2023).

Nature Communications, 14(1):3993. PMID: 37414772 PDF

Single cell evaluation of endocardial HAND2 gene regulatory networks reveals critical HAND2 dependent pathways impacting cardiac morphogenesis.

George RM, Firulli BA, Podicheti R, Rusch DB, Mannion BJ, Pennacchio LA, Osterwalder M, Firulli AB (2023).

Development, dev.201341. PMID: 36620995 PDF

2022

Wt1 transcription factor impairs cardiomyocyte specification and drives a phenotypic switch from myocardium to epicardium.

Marques IJ, Ernst A, Arora P, Vianin A, Hetke T, Sanz-Morejón A, Naumann U, Odriozola A, Langa X, Andrés-Delgado L, Zuber B, Torroja C, Osterwalder M, Simões F, Englert C, Mercader N (2022).

Development, 149(6):dev200375. PMID: 35312773 PDF

Characterization of mammalian in vivo enhancers using mouse transgenesis and CRISPR genome editing.

Osterwalder M*, Tran S*, Hunter RD, Meky EM, Von Maydell K, Harrington AN, Godoy J, Novak CS, Plajzer-Frick I, Zhu Y, Akiyama JA, Afzal V, Kvon EZ, Pennacchio LA, Dickel DE, Visel A (2022).

Methods in Molecular Biology, 2403:147-186. PMID: 34913122 PDF

2021

HAND transcription factors cooperatively specify the aorta and pulmonary trunk.

Vincentz JW, Firulli BA, Toolan KP, Osterwalder M, Pennacchio LA, Firulli AB (2021).

Developmental Biology, 476:1-10. PMID: 33757801 PDF

Bi-fated tendon-to-bone attachment cells are regulated by shared enhancers and KLF transcription factors.

Kult S, Olender T, Osterwalder M, Markman S, Leshkowitz D, Krief S, Blecher-Gonen R, Ben-Moshe S, Farack L, Keren-Shaul H, Salame TM, Capellini TD, Itzkovitz S, Amit I, Visel A, Zelzer E (2021).

Elife, 10:e55361. PMID: 33448926 PDF

2020

The mole genome reveals regulatory rearrangements associated with adaptive intersexuality.

Real FM, Haas SA, Franchini P, Xiong P, Simakov O, Kuhl H, Schöpflin R, Heller D, Moeinzadeh MH, Heinrich V, Krannich T, Bressin A, Hartmann MF, Wudy SA, Dechmann DKN, Hurtado A, Barrionuevo FJ, Schindler M, Harabula I, Osterwalder M, Hiller M, Wittler L, Visel A, Timmermann B, Meyer A, Vingron M, Jiménez R, Mundlos S, Lupiáñez DG (2020).

Science, 370:208-214. PMID 33033216 PDF

Loss of extreme long-range enhancers in human neural crest drives a craniofacial disorder.

Long HK, Osterwalder M, Welsh IC, Hansen K, Davies JOJ, Liu YE, Koska M, Adams AT, Aho R, Arora N, Ikeda K, Ruth RM, Sauka-Spengler T, Porteus MH, Mohun T, Dickel DE, Swigut T, Hughes JR, Higgs DR, Visel A, Selleri L, Wysocka J (2020).
Cell Stem Cell, 27:765-783.e14. PMID 32991838 PDF